DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022701
GeneYipf1
Synonyms
Desc.Yip1 domain family, member 1
LocusNM_145550 chr4:106986968-107032428(+)
NM_001205156 chr4:106986968-107032428(+)
DB links


Entrez 230584
MGI 1915532
Ensembl ENSMUSG00000057375
Vega OTTMUSG00000008802
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023354
(v2.0)
Yipf1NM_001205156,NM_145550230584
26.1181111.98724.313463.295233.75029.9259715.678229.185535.737811.18
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022701
(v1.0)
Yipf1230584
Maternal RNA0.83211
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023354
(v2.0)
Yipf1230584
730/576-0.1707400/576-0.640963/5760.4011239/5760.06292/576-0.5834723/576-0.2709
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023354
(v2.0)
Yipf1230584
291/217-0.0891142/217-0.723749/2171.4049185/2171.092333/217-0.6437273/217-0.2668
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023354
(v2.0)
Yipf1230584
124.133517869.74
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023354
(v2.0)
Yipf1230584
33.90688241.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
117.36716.677648.980724.341511.3834
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
595.38368.9296245.005135.89843.6424
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
122.7188.7506418.1956
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
119.78516.510121.2872
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
136.033135.488
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
122.7898.6307823.3471
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
45.348523.502725.6314
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
131.614148.834
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022701
(v1.0)
Yipf1NM_145550230584
16.714813.4251
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022701
(v1.0)
Yipf1NM_145550230584
4.683872.46817
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022701
(v1.0)
371C0103F02-3Mm.29118LOC230584230584
U004602NAP008779-001C030002N13Rik;TC799877,TC799876Q91VU1U,F,22.61172.87452.98562.99322.43912.6482.5197
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022701
(v1.0)
1424196_atMm.29118Yipf1NM_145550.2230584
937.575308.25641.225340.3285.675
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022701
(v1.0)
Yipf1230584
200200