DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022813
GeneZcchc6
Synonyms
Desc.zinc finger, CCHC domain containing 6
LocusNM_153538 chr13:59873240-59924508(-)
DB links


Entrez 214290
MGI 2387179
Ensembl ENSMUSG00000035248
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023474
(v2.0)
Zcchc6NM_153538214290
9.958189.5378813.348620.546226.56355.3288121.966310.173422.85134.82955
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022813
(v1.0)
Zcchc6214290
MGA0.96103
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023474
(v2.0)
Zcchc6214290
681/3960.2687462/3960.1059161/3962.268509/3961.687152/396-0.8587391/396-0.6157
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023474
(v2.0)
Zcchc6214290
326/1660.4585221/1660.2951151/1663.3722416/1662.63849/166-2.0311103/166-1.2755
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023474
(v2.0)
Zcchc6214290
45.863212237.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023474
(v2.0)
Zcchc6214290
17.50758919.67
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
9.912899.2517115.291218.382315.3735
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
159.793155.559209.567308.368247.955
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
10.36483.6418110.0938
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
10.11719.158827.52978
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
232.204140.714
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
10.37093.591938.25841
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
14.157217.748815.784
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
176.271112.474
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022813
(v1.0)
Zcchc6NM_153538214290
20.83568.96364
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022813
(v1.0)
Zcchc6NM_153538214290
1.233252.14128
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022813
(v1.0)
8488H3067A02-3MGC38585214290
U034867NAP084456-1MGC38585;TC854007,TC854006,TC810735,TC801450U,F,23.44053.45223.65143.74113.57993.68333.6085
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022813
(v1.0)
1433910_atMm.233082Zcchc6NM_153538.3214290
00224.05285.75281.55
0022813
(v1.0)
1441986_atMm.233082Zcchc6NM_153538.3214290
00102.25071.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022813
(v1.0)
A_51_P243695Zcchc6NM_153538214290
11P0.6170.143P
Proteome N/A