DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0023261
GeneZkscan1
SynonymsKOX18
Desc.zinc finger with KRAB and SCAN domains 1
LocusNM_133906 chr5:138526312-138549050(+)
NM_029869 chr5:138526312-138549050(+)
DB links


Entrez 74570
MGI 1921820
Ensembl ENSMUSG00000029729
Vega OTTMUSG00000022628
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023919
(v2.0)
Zkscan1NM_029869,NM_13390674570
4.282447.4966713.314521.654510.36882.8098610.768510.402611.03282.2846
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0023261
(v1.0)
Zkscan174570
Major ZGA0.97498
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023919
(v2.0)
Zkscan174570
683/3870.306507/3870.2728153/3872.2271458/3871.5681149/3870.675932/3870.6673
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023919
(v2.0)
Zkscan174570
298/1450.5234231/1450.5525150/1453.5436408/1452.802544/1450.3289250/1450.1853
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023919
(v2.0)
Zkscan174570
40.27289741.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023919
(v2.0)
Zkscan174570
11.42254624.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
7.790719.2077716.10797.171247.5264
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
22.479232.561830.392516.700717.1734
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
8.145911.5661310.0459
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
7.951219.115317.69578
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
148.47310.132
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
8.150641.544688.44047
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
14.91346.924127.59883
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
45.626850.0005
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
7.8132912.5276
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0023261
(v1.0)
Zkscan1NM_029869,NM_13390674570
1.572091.44131
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0023261
(v1.0)
11496H3117A04-3Mm.2131149130423L19Rik74570
U006333NAP092385-0019130423L19Rik;AI788588;TC810850Q91W99U,F,23.10463.15782.96343.29072.23612.42062.2655
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0023261
(v1.0)
1418801_atMm.213114Zkscan1NM_133906.4,NM_029869.174570
89.325152.475167.425155.589.825
0023261
(v1.0)
1439908_atMm.213114Zkscan1NM_133906.4,NM_029869.174570
163.375147.925197.45236.6155.175
0023261
(v1.0)
1429152_atMm.213114Zkscan1NM_133906.4,NM_029869.174570
00167.700
0023261
(v1.0)
1440771_atMm.213114Zkscan1NM_133906.4,NM_029869.174570
0097.70104.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0023261
(v1.0)
A_51_P190572Zkscan1NM_13390674570
11P0.5760.12P
0023261
(v1.0)
A_52_P322364Zkscan1NM_13390674570
11P0.730.202P
Proteome N/A