DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0023353
Genel7Rn6
Synonymsl(7)6Rn
Desc.lethal, Chr 7, Rinchik 6
LocusNM_026304 chr7:97067199-97089695(-)
DB links


Entrez 67669
MGI 96738
Ensembl ENSMUSG00000062797
Vega OTTMUSG00000023022
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2024014
(v2.0)
l7Rn6NM_001291286,NM_001291287,NM_001291288,NM_001291289,NM_026304,NR_11191667669
8.2969233.20920.662742.959651.45832.768423.211511.225441.864644.5638
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0023353
(v1.0)
l7Rn667669
Major ZGA0.87609
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2024014
(v2.0)
l7Rn667669
472/3070.1074370/3070.152650/3070.9555144/3070.237367/307-0.1363359/307-0.3722
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2024014
(v2.0)
l7Rn667669
226/166-0.0673147/166-0.289647/1661.7092134/1661.011418/166-1.1051124/166-1.0113
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2024014
(v2.0)
l7Rn667669
37.791611333.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2024014
(v2.0)
l7Rn667669
7.1702799.08
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0023353
(v1.0)
l7Rn6NM_02630467669
33.681213.550529.877733.58314.7998
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0023353
(v1.0)
l7Rn6FR346627,FR399158,NM_02630467669
32.84797.9461722.998530.36417.8432
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0023353
(v1.0)
l7Rn6NM_02630467669
35.21682.90114.7839
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0023353
(v1.0)
l7Rn6NM_02630467669
34.375113.41448.18398
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0023353
(v1.0)
l7Rn6FR346627,FR399158,NM_02630467669
8.069519.18483
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0023353
(v1.0)
l7Rn6NM_02630467669
35.23732.861278.97591
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0023353
(v1.0)
l7Rn6NM_02630467669
27.662132.425727.5897
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0023353
(v1.0)
l7Rn6FR346627,FR399158,NM_02630467669
30.035927.3206
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0023353
(v1.0)
l7Rn6NM_02630467669
7.5486973.4952
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0023353
(v1.0)
l7Rn6NM_02630467669
0.8697991.66694
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0023353
(v1.0)
12053H3131G01-3Mm.286790610007P06Rik67669
U028846NAP008471-0010610007P06Rik;TC887331,TC887329,TC887328Q9CZT72.72942.97053.42323.66933.57663.77683.8434
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0023353
(v1.0)
1419351_a_atMm.28679l7Rn6NM_026304.267669
273.2750122.4338.35481.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0023353
(v1.0)
A_51_P1094961700029I01RikNM_02728567669
11P0.8240.304P
0023353
(v1.0)
A_51_P1302544931420C21RikNM_17769867669
11P1.0510.82P
0023353
(v1.0)
A_51_P303095AI428795NM_02447767669
11P1.0190.916P
0023353
(v1.0)
A_51_P317618D15Ertd785eNM_02579567669
11P1.7160.117P
0023353
(v1.0)
A_51_P365378Vmd2l1NM_14538867669
11P0.6140.13P
0023353
(v1.0)
A_51_P437538LOC331392NM_19863367669
11P0.7820.247P
0023353
(v1.0)
A_51_P493543Ftl2NM_00804967669
11P1.3660.218P
0023353
(v1.0)
A_52_P10424121700029I01RikNM_02728567669
11P0.5440.105P
0023353
(v1.0)
A_52_P371466D15Ertd785eNM_02579567669
11P1.1970.422P
0023353
(v1.0)
A_52_P4871561700029I01RikNM_02728567669
11P1.7430.143P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0023353
(v1.0)
l7Rn667669
120.67120.67