DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004129
GeneCcrn4l
SynonymsCcr4
nocturnin
DescriptionCCR4 carbon catabolite repression 4-like (S. cerevisiae)
LocusNM_009834 UCSC: chr3:51028369-51055576(+) OLP: chr3:51028369-51055576(+)
DB links


Entrez 12457
MGI 109382
Ensembl ENSMUSG00000023087
Vega OTTMUSG00000027519
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004129
(v2.0)		Ccrn4lNM_00983412457
2.05294126.409122.22540.02724.873565.694367.50736113.2778.114085.45102
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004129
(v2.0)		Ccrn4l12457
773/4900.1446462/490-0.2007156/4901.9238335/4900.7796153/4900.3757994/4900.4204
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004129
(v2.0)		Ccrn4l12457
397/1880.5631229/1880.1676151/1883.2042303/1882.005464/1880.494385/1880.4328
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004129
(v2.0)		Ccrn4l12457
101.38818156.02
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004129
(v2.0)		Ccrn4l12457
26.957110226.43
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004243
(v1.0)		22138L0943G09-3Mm.86541Ccrn4l12457
NAP056041-1Ccrn4lTC911657O357102.48362.64512.47882.54992.52322.47662.449
MOE430 N/A
Agilent44K N/A
Proteome N/A