DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2005397
GeneCyhr1
SynonymsChrp
Descriptioncysteine and histidine rich 1
LocusNM_019396 UCSC: chr15:76473825-76490638(-) OLP: chr15:76473825-76490638(-)
NM_001276321 UCSC: chr15:76477357-76487331(-) OLP: chr15:76477357-76487331(-)
NM_001276333 UCSC: chr15:76488566-76490166(-) OLP: chr15:76488566-76490166(-)
NM_001276322 UCSC: chr15:76488566-76490638(-) OLP: chr15:76488566-76490638(-)
NM_001276335 UCSC: chr15:76488566-76490166(-) OLP: chr15:76488566-76490166(-)
NM_001276334 UCSC: chr15:76488566-76490166(-) OLP: chr15:76488566-76490166(-)
NM_180962 UCSC: chr15:76488566-76490638(-) OLP: chr15:76488566-76490638(-)
DB links


Entrez 54151
MGI 1859320
Ensembl ENSMUSG00000053929
Vega OTTMUSG00000040104
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005397
(v2.0)		Cyhr1NM_001276321,NM_001276322,NM_001276333,NM_001276334,NM_001276335,NM_019396,NM_18096254151
63.273523.786816.76929.830810.145941.437937.704225.253214.93843.6686
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005397
(v2.0)		Cyhr154151
804/5600.0089330/560-0.877135/5601.5283344/5600.62662/560-1.1049512/560-0.7269
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005397
(v2.0)		Cyhr154151
338/246-0.0542123/246-1.109474/2461.8179206/2461.067627/246-1.1016204/246-0.8646
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005397
(v2.0)		Cyhr154151
58.074318431.56
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005397
(v2.0)		Cyhr154151
23.181910721.67
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005459
(v1.0)		3357C0643H10-3Mm.18561Cyhr154151
U036354NAP098427-001Cyhr1;TC842793,TC842792Q9D1343.37323.23413.28083.18733.90793.58983.8469
0005459
(v1.0)		6825H3035C06-3Mm.18561Cyhr154151
U036354NAP019700-001Cyhr1;TC842788Q9D1343.18423.09763.42943.7033.48723.56163.6618
0005459
(v1.0)		19452L0274B09-3Mm.18561Cyhr154151
U036354NAP098427-001Cyhr1;TC842792Q9D1342.46942.4662.39882.32532.32952.4962.5227
MOE430 N/A
Agilent44K N/A
Proteome N/A