DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010028
GeneHmgn2
SynonymsHMG-17
Hmg17
Descriptionhigh mobility group nucleosomal binding domain 2
LocusNM_016957 UCSC: chr4:133520654-133523906(-) OLP: chr4:133520654-133523906(-)
DB links


Entrez 15331
MGI 96136
Ensembl ENSMUSG00000003038
Vega OTTMUSG00000009711
Featureprotein-coding
GO_BP
  •   3 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      regulation of development, heterochronic (GO:0040034)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010028
(v2.0)		Hmgn2NM_01695715331
84.33167.848435.412428.267461.9648310.01158.82016.729482.003416.738
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010028
(v2.0)		Hmgn215331
808/4370.3732451/437-0.0705103/4371.4905245/4370.49413/437-2.92120/437-2.4491
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010028
(v2.0)		Hmgn215331
466/1660.9721214/1660.248995/1662.7092222/1661.73544/166-3.031163/166-1.9715
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010028
(v2.0)		Hmgn215331
67.545115643.3
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010028
(v2.0)		Hmgn215331
14.049410014.05
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010145
(v1.0)		5044G0120C02-3Mm.911Hmgn215331
U025628NAP097532-001TC903147,TC903143P09602U,F,23.08933.13873.34593.90973.4713.72343.6236
MOE430 N/A
Agilent44K N/A
Proteome N/A