DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020879
GeneTaf3
SynonymsmTAFII140
DescriptionTAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_027748 UCSC: chr2:9836179-9970236(-) OLP: chr2:9836179-9970236(-)
DB links


Entrez 209361
MGI 2388097
Ensembl ENSMUSG00000025782
Vega OTTMUSG00000011183
Featureprotein-coding
GO_BP
  •   7 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
      negative regulation of sequence-specific DNA binding transcription factor activity (GO:0043433)
      maintenance of protein location in nucleus (GO:0051457)
GO_MF
GO_CC
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020879
(v2.0)		Taf3NM_027748209361
3.4240146.029451.869131.58611.46522.91264.7172380.078115.3323.01449
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020879
(v2.0)		Taf3209361
717/4320.2177462/432-0.0193167/4322.1985401/4321.219135/432-1.541224/432-1.5405
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020879
(v2.0)		Taf3209361
377/1750.5916216/1750.1865158/1753.366379/1752.429312/175-1.7269121/175-1.122
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020879
(v2.0)		Taf3209361
44.902714431.18
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020879
(v2.0)		Taf3209361
11.724910411.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020281
(v1.0)		5935H3013B01-3Mm.86343Taf3209361
U022280NAP121079-001TAF140;TC926457Q9CUA0U,F,23.3493.32092.93412.95412.50542.61752.492
0020281
(v1.0)		14229J0425E10-3Mm.86343Taf3209361
3.29653.00322.73272.91532.43972.61762.4878
MOE430 N/A
Agilent44K N/A
Proteome N/A