DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002425
GeneAlkbh5
SynonymsAbh5
Ofoxd
Desc.alkB, alkylation repair homolog 5 (E. coli)
LocusNM_172943 chr11:60351185-60372014(+)
DB links


Entrez 268420
MGI 2144489
Ensembl ENSMUSG00000042650
Vega OTTMUSG00000007765
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
  •   4 Terms
      oxidoreductase activity (GO:0016491)
      oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702)
      oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
      metal ion binding (GO:0046872)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002309
(v2.0)
Alkbh5NM_172943268420
20.1793114.481116.4330.168513.141415.501419.0352146.29813.694814.7708
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002425
(v1.0)
Alkbh5268420
Maternal RNA0.98838
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002309
(v2.0)
Alkbh5268420
900/4410.5153483/4410.015319/4413.0992751/4412.09369/441-0.6111662/441-0.0133
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002309
(v2.0)
Alkbh5268420
560/1990.9763242/1990.1653307/1994.1458661/1993.047216/199-1.5212139/199-1.1086
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002309
(v2.0)
Alkbh5268420
46.538120522.7
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002309
(v2.0)
Alkbh5268420
14.06811688.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
119.04780.973322.46569.1089313.3581
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
213.604115.67135.735815.847624.8311
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
124.4757.3797888.3436
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
121.580.1602108.588
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
117.445124.742
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
124.5477.2787119.095
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
20.79978.795039.53899
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
14.956314.6761
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002425
(v1.0)
Alkbh5NM_172943268420
71.19454.33333
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002425
(v1.0)
Alkbh5NM_172943268420
7.3186214.4646
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002425
(v1.0)
18394L0205E02-3Mm.137177E130207K11268420
U043176NAP121999-001TC913819U,F,23.38693.63983.24453.35653.12693.25233.2398
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002425
(v1.0)
1437728_atMm.262056Alkbh5NM_172943.4268420
458.375822.15303.17500
0002425
(v1.0)
1434701_atMm.262056Alkbh5NM_172943.4268420
4207.155173.9751784.41239.62392.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002425
(v1.0)
A_51_P295215AW050020NM_172943268420
11P1.1880.335P
Proteome N/A