DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002989
GeneAtf1
Synonyms
Descriptionactivating transcription factor 1
LocusNM_007497 UCSC: chr15:100058290-100091679(+) OLP: chr15:100058290-100091679(+)
DB links


Entrez 11908
MGI 1298366
Ensembl ENSMUSG00000023027
Vega OTTMUSG00000036768
Featureprotein-coding
GO_BP
  •   6 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of neuron projection development (GO:0010976)
      cellular protein complex assembly (GO:0043623)
      positive regulation of DNA replication (GO:0045740)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO_MF
  •   6 Terms
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity (GO:0003705)
      protein complex binding (GO:0032403)
      sequence-specific DNA binding (GO:0043565)
      protein heterodimerization activity (GO:0046982)
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2002893 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002989
(v1.0)		Atf1NM_00749711908
36.568737.544953.841263.603116.0716
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002989
(v1.0)		Atf1NM_00749711908
38.235912.247640.9623
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002989
(v1.0)		Atf1NM_00749711908
37.32237.167946.6756
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002989
(v1.0)		Atf1NM_00749711908
38.258112.079851.1922
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002989
(v1.0)		Atf1NM_00749711908
49.848661.411350.4322
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002989
(v1.0)		Atf1NM_00749711908
117.916324.598
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002989
(v1.0)		Atf1NM_00749711908
22.056736.3521
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002989
(v1.0)		16253K0347H05-3Mm.676Atf111908
U016666NAP095407-001TC943039,TC943037,TC854383P81269U,F,23.89963.76843.3553.55873.39683.33523.3656
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002989
(v1.0)		1417296_atMm.676Atf1NM_007497.311908
376.85636.75722.7859.325488.9
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0002989
(v1.0)		A_52_P228079Atf1NM_00749711908
11P0.7770.26P
0002989
(v1.0)		A_52_P32756Atf1NM_00749711908
11P0.7870.251P
Proteome N/A