DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015752
GenePan2
SynonymsTcf3
A1
ALF2
bHLHb21
E12
E2A
E47
Pan1
Tcfe2a
Desc.transcription factor 3
LocusNM_001252326 chr10:127740391-127758414(+)
NM_001252327 chr10:127740391-127758414(+)
NM_133992 chr10:127740391-127758414(+)
DB links


Entrez 103135
MGI 1918984
Ensembl ENSMUSG00000005682
Featureprotein-coding
GO(BP)
  •   4 Terms
      nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)
      nuclear-transcribed mRNA poly(A) tail shortening (GO:0000289)
      nuclear-transcribed mRNA catabolic process, exonucleolytic (GO:0000291)
      ubiquitin-dependent protein catabolic process (GO:0006511)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016219
(v2.0)
Pan2NM_001252326,NM_001252327,NM_133992103135
3.4515568.5965113.0217.199313.482714.092910.036995.486711.67769.76495
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015752
(v1.0)
Pan2103135
Minor ZGA0.99226
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016219
(v2.0)
Pan2103135
609/431-0.014375/431-0.3162102/4311.496221/4310.365836/431-1.4982321/431-1.021
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016219
(v2.0)
Pan2103135
262/201-0.1298174/201-0.322594/2012.4353200/2011.31337/201-2.622858/201-2.3624
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016219
(v2.0)
Pan2103135
83.621913561.94
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016219
(v2.0)
Pan2103135
14.9425925.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015752
(v1.0)
Pan2NM_133992103135
70.755977.655612.69399.239937.10652
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015752
(v1.0)
Pan2NM_133992103135
630.042621.047114.35397.539370.5695
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015752
(v1.0)
Pan2NM_133992103135
73.98181.2570684.724
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015752
(v1.0)
Pan2NM_133992103135
72.213676.875970.7221
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015752
(v1.0)
Pan2NM_133992103135
1052.251050.32
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015752
(v1.0)
Pan2NM_133992103135
74.02481.2398477.5656
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015752
(v1.0)
Pan2NM_133992103135
11.75268.921528.09111
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015752
(v1.0)
Pan2NM_133992103135
228.665175.789
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015752
(v1.0)
Pan2NM_133992103135
49.322213.3047
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015752
(v1.0)
Pan2NM_133992103135
48.141852.6126
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015752
(v1.0)
18432L0207B04-3Mm.325801200014O24Rik103135
U012181NAP000763-002TC921668,TC853787,TC826691Q99JJ9U,F,24.15984.23653.53193.29273.13553.27813.2155
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015752
(v1.0)
1426700_a_atMm.244183Pan2NM_133992.2103135
334.775537.975184.77573.625107
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015752
(v1.0)
A_51_P402261Usp52NM_133992103135
11P1.5170.154P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015752
(v1.0)
Pan2103135
010010