DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018800
GeneShroom2
SynonymsApxl
Shrm2
Desc.shroom family member 2
LocusNM_172441 chrX:149044052-149204004(-)
DB links


Entrez 110380
MGI 107194
Ensembl ENSMUSG00000045180
Vega OTTMUSG00000019337
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019340
(v2.0)
Shroom2NM_001290684,NM_001290685,NM_001290686,NM_001290687,NM_172441110380
2.7194530.199153.347313.03924.494443.849160.7670855.2795.727083.24076
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018800
(v1.0)
Shroom2110380
Minor ZGA0.99638
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019340
(v2.0)
Shroom2110380
391/1590.7815252/1590.545349/1591.8259192/1591.588291/1591.2312715/1591.5636
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019340
(v2.0)
Shroom2110380
243/940.8506153/940.581545/942.3949160/942.069547/941.0256421/941.5537
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019340
(v2.0)
Shroom2110380
35.48658939.87
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019340
(v2.0)
Shroom2110380
11.78426219.01
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
31.433736.84229.712593.111170.521401
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
69.296674.155721.5846.340730.952659
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
32.86680.98549840.1956
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
32.081336.472240.9586
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
46.470450.3449
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
32.88590.97244.922
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
8.992343.003963.92878
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
3.542964.63234
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018800
(v1.0)
Shroom2NM_172441110380
24.279110.0754
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018800
(v1.0)
Shroom2NM_172441110380
1.852333.90451
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018800
(v1.0)
1433992_atMm.40796Shroom2NM_172441.2110380
1381.4251469.0751011.425346.325547.7
0018800
(v1.0)
1442046_atMm.40796Shroom2NM_172441.2110380
439.075396.0251054.6500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018800
(v1.0)
A_51_P311995ApxlAK049850110380
11P1.020.877P
Proteome N/A