DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021692
GeneUbap1
SynonymsNAG20
Desc.ubiquitin-associated protein 1
LocusNM_023305 chr4:41296029-41336799(+)
DB links


Entrez 67123
MGI 2149543
Ensembl ENSMUSG00000028437
Vega OTTMUSG00000006663
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022328
(v2.0)
Ubap1NM_001290454,NM_02330567123
19.808111.794714.839756.426430.089319.44314.968815.289932.05321.1574
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021692
(v1.0)
Ubap167123
2-Cell Transient0.99632
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022328
(v2.0)
Ubap167123
555/3170.2943332/317-0.0493181/3172.7463402/3171.666226/317-1.5145145/317-1.7173
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022328
(v2.0)
Ubap167123
275/1180.7031144/1180.1697176/1184.0448388/1183.021810/118-1.415546/118-1.9239
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022328
(v2.0)
Ubap167123
44.345211538.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022328
(v2.0)
Ubap167123
12.63568215.41
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
12.2610.278741.992420.848210.5889
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
19.170715.694564.740347.651715.9998
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
12.8197.0482111.2142
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
12.512610.175511.3297
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
11.576812.8761
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
12.82646.9516812.426
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
38.878420.129722.0895
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
42.984445.5357
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021692
(v1.0)
Ubap1NM_02330567123
5.3617624.2884
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021692
(v1.0)
Ubap1NM_02330567123
1.804750.498085
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021692
(v1.0)
2280C0308G07-3Mm.29877Ubap167123
2.65292.63452.27562.36762.00782.22542.2128
0021692
(v1.0)
3963C0908E12-3Mm.29877Ubap167123
U004210NAP001111-001Ubap;Ubap1;TC851321,TC814301Q9ERV5U,F,23.54553.40283.46213.84293.79773.6633.7496
0021692
(v1.0)
5029G0119H07-3Mm.29877Ubap167123
U004210NAP093196-001Ubap;Ubap1;TC814301Q9ERV5U,F,23.70613.62243.41823.5073.66553.53323.7477
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021692
(v1.0)
1423185_a_atMm.289795Ubap1NM_023305.367123
00605.275199.7159.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021692
(v1.0)
A_52_P408499Ubap1AK05134667123
11P1.5130.218P
Proteome N/A