DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022456
GeneWars
Synonyms
Desc.tryptophanyl-tRNA synthetase
LocusNM_001164488 chr12:110098240-110131408(-)
NM_011710 chr12:110098240-110131421(-)
NM_001164314 chr12:110098240-110132384(-)
DB links


Entrez 22375
MGI 104630
Ensembl ENSMUSG00000021266
Vega OTTMUSG00000034952
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023107
(v2.0)
WarsNM_001164314,NM_001164488,NM_01171022375
163.31743.181840.736420.849631.553118.183619.807751.864229.564317.4861
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022456
(v1.0)
Wars22375
Maternal RNA0.91509
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023107
(v2.0)
Wars22375
692/4720.0391474/472-0.1099248/4722.6418708/4721.910615/472-2.8375134/472-2.4027
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023107
(v2.0)
Wars22375
328/1960.2289222/1960.0632214/1963.6479579/1962.87819/196-2.265356/196-2.3755
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023107
(v2.0)
Wars22375
92.920215759.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023107
(v2.0)
Wars22375
21.22968225.89
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
44.893728.299215.488221.855314.0469
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
103.39880.086865.480876.098770.6521
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
46.940559.727230.875
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
45.818628.01538.4841
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
51.209444.8184
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
46.967858.909242.2081
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
14.339621.102220.4324
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
80.493590.6
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
10.44818.95643
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022456
(v1.0)
WarsNM_001164314,NM_001164488,NM_01171022375
21.79313.337
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022456
(v1.0)
1228C0188H11-3Mm.38433Wars22375
U034345NAP096747-001Wars;TC937287,TC880384,TC880381,TC880380P32921U,F4.24924.12323.59443.81333.70483.90093.9985
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022456
(v1.0)
1415694_atMm.38433WarsNM_001164314.1,NM_001164488.1,NM_011710.322375
79.797.8573.775100.6566.825
0022456
(v1.0)
1425106_a_atMm.38433WarsNM_001164314.1,NM_001164488.1,NM_011710.322375
71.6561.626.325081.8
0022456
(v1.0)
1434813_x_atMm.38433WarsNM_001164314.1,NM_001164488.1,NM_011710.322375
233.125000329.95
0022456
(v1.0)
1437832_x_atMm.38433WarsNM_001164314.1,NM_001164488.1,NM_011710.322375
182.875181.15127.225170.125201.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022456
(v1.0)
A_52_P139579WarsNM_01171022375
11P1.6020.133P
0022456
(v1.0)
A_52_P35174WarsNM_01171022375
11P1.3070.291P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022456
(v1.0)
Wars22375
31023127