DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009608
GeneGtf2ird1
SynonymsAlb-c-myc line 166.8
Alb/c-myc line 166.8
BEN
binding factor for early enhancer
c-myc line 166.8
Cream1
ESTM9
GTF3
MusTRD1
Tg(Alb1-Myc)166.8Sst
WBSCR11
Descriptiongeneral transcription factor II I repeat domain-containing 1
LocusNM_001081464 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081465 UCSC: chr5:134833531-134932132(-) OLP: chr5:134833531-134932132(-)
NM_020331 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081466 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081462 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081467 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001244936 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081463 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081468 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081470 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081469 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
DB links


Entrez 57080
MGI 1861942
Ensembl ENSMUSG00000023079
Featureprotein-coding
GO_BP
GO_MF
  •   2 Terms
GO_CC
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009608
(v2.0)		Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_001244936,NM_02033157080
2.5319616.28220.51154.362755.660882.358218.8148914.7652.441612.69337
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009608
(v2.0)		Gtf2ird157080
682/483-0.015422/483-0.310364/4830.6718240/4830.3208170/4830.54741237/4830.7562
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009608
(v2.0)		Gtf2ird157080
304/1940.1345156/194-0.428159/1941.8205183/1941.236388/1940.903597/1941.0186
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009608
(v2.0)		Gtf2ird157080
81.014713759.13
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009608
(v2.0)		Gtf2ird157080
26.23247933.21
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009729
(v1.0)		20816L0813H02-3Gtf2ird157080
TC921408,TC916178,TC877218,TC831930,TC831929U,F3.58663.43263.00053.34573.19523.45683.471
MOE430 N/A
Agilent44K N/A
Proteome N/A