DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009729
GeneH3f3a
SynonymsH3.3A
DescriptionH3 histone, family 3A
LocusNM_008210 UCSC: chr1:182732699-182743734(-) OLP: chr1:182732699-182743734(-)
DB links


Entrez 15078
MGI 1097686
Ensembl ENSMUSG00000060743
Vega OTTMUSG00000021525
Featureprotein-coding
GO_BP
  •   3 Terms
GO_MF
  •   3 Terms
      RNA polymerase II core promoter sequence-specific DNA binding (GO:0000979)
      RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980)
      nucleosomal DNA binding (GO:0031492)
GO_CC
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009729
(v2.0)		H3f3aNM_00821015078
137.603113.025133.689145.531232.86574.25988.8479105.854213.834704.36
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009729
(v2.0)		H3f3a15078
781/4100.416522/4100.2317679/4104.28892269/4103.791522/410-2.1127183/410-1.7548
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009729
(v2.0)		H3f3a15078
459/1341.2572276/1340.9212573/1345.57481680/1344.95359/134-1.730571/134-1.496
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009729
(v2.0)		H3f3a15078
61.416917036.13
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009729
(v2.0)		H3f3a15078
14.967912112.37
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009850
(v1.0)		17751L0013A01-3Mm.89136H3f3a15078
U022145NAP028194-1TC924255,TC924252,TC924251U,F,23.95974.11963.84764.59464.80774.68444.6666
MOE430 N/A
Agilent44K N/A
Proteome N/A